{"id":138,"date":"2024-06-28T14:07:39","date_gmt":"2024-06-28T14:07:39","guid":{"rendered":"http:\/\/www.gammadelta.pl\/?page_id=138"},"modified":"2025-01-29T15:57:46","modified_gmt":"2025-01-29T15:57:46","slug":"useful-links","status":"publish","type":"page","link":"https:\/\/www.gammadelta.pl\/index.php\/useful-links\/","title":{"rendered":"Useful links"},"content":{"rendered":"\n<p>Author contribution generator [following CrediT]: <a href=\"https:\/\/credit.metabolomics.fgu.cas.cz\/\">link<\/a><\/p>\n\n\n\n<p><\/p>\n\n\n\n<p>RNAseq data-related links<\/p>\n\n\n\n<p>Dataset search: <a href=\"https:\/\/www.ncbi.nlm.nih.gov\/gds\" target=\"_blank\" rel=\"noreferrer noopener\">link<\/a><\/p>\n\n\n\n<p>GEPIA [Gene expression profiling interactive analysis]: <a href=\"http:\/\/gepia.cancer-pku.cn\/index.html\" target=\"_blank\" rel=\"noreferrer noopener\">link<\/a><\/p>\n\n\n\n<p>cBioPortal &#8211; cancer-related RNAseq analysis: <a rel=\"noreferrer noopener\" href=\"https:\/\/www.cbioportal.org\/\" target=\"_blank\">link<\/a><\/p>\n\n\n\n<p>The University of ALabama at Birmingham CANcer data analysis Portal: <a href=\"https:\/\/ualcan.path.uab.edu\/\" data-type=\"URL\" data-id=\"https:\/\/ualcan.path.uab.edu\/\" target=\"_blank\" rel=\"noreferrer noopener\">link<\/a><\/p>\n\n\n\n<p>KMPlot for Kaplan Meier survival analysis: <a href=\"https:\/\/kmplot.com\/analysis\/\" data-type=\"URL\" data-id=\"https:\/\/kmplot.com\/analysis\/\" target=\"_blank\" rel=\"noreferrer noopener\">link <\/a><\/p>\n\n\n\n<p>TIMER: Tumor IMmune Estimation Resource: <a rel=\"noreferrer noopener\" href=\"https:\/\/cistrome.shinyapps.io\/timer\/\" data-type=\"URL\" data-id=\"https:\/\/cistrome.shinyapps.io\/timer\/\" target=\"_blank\">link<\/a><\/p>\n\n\n\n<p>useGalaxy &#8211; full R-based cloud analysis suite: <a rel=\"noreferrer noopener\" href=\"http:\/\/usegalaxy.eu\" data-type=\"URL\" data-id=\"usegalaxy.eu\" target=\"_blank\">eu<\/a> <a href=\"http:\/\/usegalaxy.org\">org\/USA<\/a><\/p>\n\n\n\n<p>SRPlot &#8211; KEGG analysis, various plots for RNAseq data: <a rel=\"noreferrer noopener\" href=\"https:\/\/www.bioinformatics.com.cn\/srplot\" target=\"_blank\">link<\/a><\/p>\n\n\n\n<p>Prediction of gene function and interaction: <a rel=\"noreferrer noopener\" href=\"http:\/\/genemania.org\/\" data-type=\"URL\" data-id=\"http:\/\/genemania.org\/\" target=\"_blank\">GeneMania <\/a>and <a href=\"https:\/\/metascape.org\/gp\/index.html#\/main\/step1\" data-type=\"URL\" data-id=\"https:\/\/metascape.org\/gp\/index.html#\/main\/step1\" target=\"_blank\" rel=\"noreferrer noopener\">Metascape<\/a><\/p>\n","protected":false},"excerpt":{"rendered":"<p>Author contribution generator [following CrediT]: link RNAseq data-related links Dataset search: link GEPIA [Gene expression profiling interactive analysis]: link cBioPortal &#8211; cancer-related RNAseq analysis: link The University of ALabama at Birmingham CANcer data analysis Portal: link KMPlot for Kaplan Meier survival analysis: link TIMER: Tumor IMmune Estimation Resource: link useGalaxy &#8211; full R-based cloud analysis [&hellip;]<\/p>\n","protected":false},"author":1,"featured_media":0,"parent":0,"menu_order":0,"comment_status":"closed","ping_status":"closed","template":"","meta":[],"_links":{"self":[{"href":"https:\/\/www.gammadelta.pl\/index.php\/wp-json\/wp\/v2\/pages\/138"}],"collection":[{"href":"https:\/\/www.gammadelta.pl\/index.php\/wp-json\/wp\/v2\/pages"}],"about":[{"href":"https:\/\/www.gammadelta.pl\/index.php\/wp-json\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"https:\/\/www.gammadelta.pl\/index.php\/wp-json\/wp\/v2\/users\/1"}],"replies":[{"embeddable":true,"href":"https:\/\/www.gammadelta.pl\/index.php\/wp-json\/wp\/v2\/comments?post=138"}],"version-history":[{"count":7,"href":"https:\/\/www.gammadelta.pl\/index.php\/wp-json\/wp\/v2\/pages\/138\/revisions"}],"predecessor-version":[{"id":190,"href":"https:\/\/www.gammadelta.pl\/index.php\/wp-json\/wp\/v2\/pages\/138\/revisions\/190"}],"wp:attachment":[{"href":"https:\/\/www.gammadelta.pl\/index.php\/wp-json\/wp\/v2\/media?parent=138"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}